locan.scripts.script_check.render_locs_per_frame_napari#
- locan.scripts.script_check.render_locs_per_frame_napari(images, pixel_size, locdata, viewer=None, transpose=True, kwargs_image=None, kwargs_points=None)[source]#
Display original recording and overlay localization spots in napari.
- Parameters:
images (
Union
[_SupportsArray
[dtype
[Any
]],_NestedSequence
[_SupportsArray
[dtype
[Any
]]],bool
,int
,float
,complex
,str
,bytes
,_NestedSequence
[Union
[bool
,int
,float
,complex
,str
,bytes
]]]) – Stack of raw data as recorded by camera.pixel_size (
float
|tuple
[float
]) – Pixel size for images (in locdata units) with shape (2,).transpose (
bool
) – If True transpose x and y axis of images.locdata (
LocData
) – Localization data that corresponds to images raw data.viewer (
Viewer
) – The viewer object on which to add the imagekwargs_image (
Optional
[dict
[str
,Any
]]) – Other parameters passed to napari.Viewer().add_image().kwargs_points (dict) – Other parameters passed to napari.Viewer().add_points().
- Returns:
Viewer with the image.
- Return type:
napari.Viewer