locan.scripts

Command-line utility scripts

The locan package provides a command-line interface. It is accessible by the base command locan and provides a number of compound commands. See available commands using locan -h.

This subpackage contains implementations of command-line scripts. Scripts are installed in bin/ as simple wrappers for these modules. They can be run directly from a terminal through locan command options as long as the correct environment is activated.

Submodules:

script_check	Show original SMLM images overlaid with localization data.
script_rois	Define regions of interest with napari and save as roi files.
script_draw_roi	Define regions of interest with matplotlib and save as roi files.
script_napari	Render localization data in napari.
script_show_versions	Show system information and dependency versions.
script_test	Run project test suite with pytest.